Anuj Karpatne

AI ⇄ Science | Knowledge-guided ML

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Hello everyone! I am an Associate Professor in the Department of Computer Science at Virginia Tech (VT) where I lead the KGML-Lab LogoKnowledge-guided Machine Learning (KGML) Lab. I also serve as a Faculty Fellow and Dean’s Fellow in the College of Engineering at VT, and on leadership roles in center-scale research projects including: co-PI & KGML lead of the $15M NSF HDR Imageomics Institute, Jump Thrust co-lead of the $18M NSF PIPP COMPASS Center, site PI & KGML co-lead of a $10M USDA SAS project, site PI and ML lead of the $1.1M NSF Eco-KGML project, and lead PI of a $1M NSF Medium project.

What is KGML? The goal of KGML is to incorpoate scientific knowledge in AI/ML models to make them scientifically grounded, interpretable, and generalizable even on out-of-distribution data. Starting with a vision article in 2017, KGML has grown into a vibrant research community spanning multiple directions, from solving partial differential equations (PDEs) to discovering governing equations, generating scientific hypotheses, and building digital twins combining physics-based and ML models. Today, KGML is leading a new paradigm in AI for Science while also advancing the Science of AI driven by the needs of problems in science and engineering. To learn more about KGML, see: KGML book, lecture recording of a tutorial on KGML, recent perspective article, and keynote talk slides from a recent KGML workshop sponsored by Schmidt Sciences.

Focus of KGML Lab: Our lab is advancing the frontiers of KGML by rethinking the assumptions that go into AI/ML models inspired by scientific knowledge. Our work has resulted in novel formulations for knowledge-guided (KG)-representation learning, KG-loss functions, KG-neural architectures, KG-interpretable AI, and more recently, KG-generative AI, KG-foundation models, and KG-agentic AI (see Publications for details). Our work is highly inter-disciplinary in nature and we have been fortunate to collaborate with an amazing network of scientists spanning environmental sciences (aquatic sciences, agriculture, remote sensing, and geophysics), biological sciences (organismal biology, biodiversity science, virology, and mechanobiology), and physical sciences (fluid dynamics, quantum mechanics, and electromagnetism), with generous support from NSF and USDA (see Funding for details on grants and collaborations).

To learn more about our research, please visit the KGML-Lab Website.

Slides from Recent Talks:

  1. Navigating Research Landscape in KGML: Problems, Methods, and Emerging Opportunities, keynote talk at the KGML workshop held at the University of Michigan in August 2025 and sponsored by Schmidt Sciences AI in Science program.
  2. Foundations and Frontiers for Generative AI in Science and Engineering, opening session of the GenAI4Science Workshop held at the Univesity of Minnesota in August 2025, co-presented with Aryan Deshwal and Jana Doppa.

Recent News

Aug 12, 2025 :zap: :loudspeaker: Co-organized the GenAI4Science Workshop: Integrating Scientific Knowledge into Generative AI at the Univesity of Minnesota. See talk slides of our opening session on Foundations and Frontiers for Generative AI in Science and Engineering co-presented with Aryan Deshwal and Jana Doppa.
Aug 10, 2025 :page_facing_up: :fire: New perspective article on scientific revolution in the age of Generative AI now published in npj Artificial Intelligence journal. It captures the community consensus on GenAI’s potential for accelerating scientific discovery, discussed at the second NSF workshop on AI-enabled scientific revolution, which anticipated many of the priorities now embraced in the America’s AI Action Plan such as AI-ready datasets, standardized evaluation, robust infrastructure, and interdisciplinary training.
Aug 08, 2025 :studio_microphone: Gave a keynote talk at the KGML workshop at the University of Michigan, sponsored by the Schmidt Sciences AI in Science program. See talk slides.
Aug 06, 2025 :studio_microphone: Gave a talk at the AI for Science Day at KDD 2025.
Jun 25, 2025 :page_facing_up: Paper on TaxaDiffusion accepted at ICCV 2025.
Jun 15, 2025 :page_facing_up: :fire: Two papers published at CVPR 2025:
  1. Fish-Vista: A multi-purpose dataset for understanding & identification of traits from fish images.
  2. PROMPT-CAM: An approach for making vision transformers interpretable for fine-grained analysis.
May 06, 2025 :sparkles: Honored to receive the Faculty Fellow award for Excellence in Research from College of Engineering (COE) at Virginia Tech in 2025.
Apr 28, 2025 :studio_microphone: Served as a panelist in the Data-Centric ML in Climate Applications panel at the ICLR Workshop on Tackling Climate Change with Machine Learning.
Apr 28, 2025 :page_facing_up: :fire: Two papers published at ICLR 2025:
  1. HComp-Net: An explainability tool for discovering evolutionary traits as hierarchical prototypes.
  2. GFI Framework: A generalized framework for solving forward and inverse problems in seismic imaging.
Apr 10, 2025 :studio_microphone: Gave a keynote talk in the AI for Biodiversity Symposium at the University of Florida.
Mar 12, 2025 :studio_microphone: Gave a talk in the Frontiers of Machine Learning and AI Seminar Series at the University of Southern California.
Feb 12, 2025 :studio_microphone: Gave a talk in the seminar series of the Center for Limnology at University of Wisconsin, Madison.
Feb 01, 2025 :sparkles: Honored to be part of a $10M USDA SAS grant as site PI from Virginia Tech.
Jan 07, 2025 :studio_microphone: Gave a talk in the Kotak IISc AI-ML Talk Series at the Indian Institute of Science (IISc) Bangalore.
Dec 10, 2024 :page_facing_up: Paper on VLM4Bio presented at NeurIPS 2024.

Selected Papers

  1. NPJ Artificial Intelligence
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    AI-enabled scientific revolution in the age of generative AI: second NSF workshop report
    Anuj Karpatne, Aryan Deshwal, Xiaowei Jia, and 4 more authors
    npj Artificial Intelligence, 2025
  2. ArXiv
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    Knowledge-guided Machine Learning: Current Trends and Future Prospects
    Anuj Karpatne, Xiaowei Jia, and Vipin Kumar
    arXiv preprint arXiv:2403.15989, 2024
  3. TKDE
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    Theory-guided data science: A new paradigm for scientific discovery from data
    Anuj Karpatne, Gowtham Atluri, James H Faghmous, and 6 more authors
    IEEE Transactions on knowledge and data engineering, 2017